- Lahontan cutthroat trout (Oncorhynchus clarkii henshawi)
- Tahoe sucker (Catostomus tahoensis)
- Paiute sculpin (Cottus beldingii)
- Sacramento pikeminnow (Ptychocheilus grandis)
In addition to these native species, Lake Tahoe also contains introduced fish species, including:
- Lake trout (Salvelinus namaycush)
- Rainbow trout (Oncorhynchus mykiss)
- Brown trout (Salmo trutta)
- Kokanee salmon (Oncorhynchus nerka)
- Chinook salmon (Oncorhynchus tshawytscha)
- Smallmouth bass (Micropterus dolomieu)
- Largemouth bass (Micropterus salmoides)